YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.7124
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKKKKREFF FCHSFFFFFY LAHFFLQLDM SWGGFKKAIN RAGASVIVKD VDKTMDKDFD  60
   61 VEERRYKTLK TAGTNLQKAA KGYLDNIRAI TNSQVTIAEI IYNLYEESKQ GQSLYSNVGT 120
  121 YYMQSVKEFD EETVKQIDGP YRETVLDPIG KFSNYFSEID EAIKKRAHKK IDYEQCKAKV 180
  181 RRLVDKPAKD AAKLPRAEKE LSMAKEIYDE LNDQLKAELP QLIALRVPFY DPSFEALVKI 240
  241 QLRFCTEGYS RLAQIQQYLD PASRDEYANG LLDGKIDDML AQMQGLSITS LGK

Type	Start	End	Confidence
Cytoplasmic	1	8	0.90
Transmembrane Helix	9	26	0.89
Non-Cytoplasmic	27	293	0.99