YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76573453
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPLRILLLG APGSGKGTQT SRLLKRFTQL QSLSSGDILR NQIRSGSAIG GEAQTYIKNG  60
   61 SLVPDNIMVG LITAELEKKK WLTQSSSWLL DGFPRTVNQA RELDRVIHDR ANFNLVVELD 120
  121 VDQKVILQRI EARWIHEASG RVYNLDYNPP KVPFKDDVTG EALTKRQDDT AQVFQKRLDQ 180
  181 YNEEIEPLKV FYKQQGLLYT VSGDTSDIIY PKLENLIVDK IM

Type	Start	End	Confidence
Signal Peptide	1	17	0.68
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	222	0.99