YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76573466
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLHISPFSV ATNALVLSLA GIASAQNLGG LDTPPQAKTD TTKATENTSS ILIKTEENSQ  60
   61 DTTNEKTTEP NTTTQETTTQ EATTTPETTK AESTDQIKTS QIVQTTKITQ TQVETSTTQV 120
  121 VQTIQASSGG TTPQVLTKQS TITAAGTQTT LVTQTLVVVD GQSQKHSTVT LQSASTVSPI 180
  181 TPNESTTVWW TPSTTQLNSG SLGKYGSATP VTENESTTIW WTPSTQITSS TTSGKASDTT 240
  241 SQKSDTGSNT KSSGGSSDTK SVWIATTGSD FASQSNSDSS STASRNSSSS ASRQAVIIGS 300
  301 KDLTWKKTLL CGGVIGVSLL LNLL

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	324	0.99