YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76573529
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFLKISTL IAIVSTLQTT LAAPPACLLA CVAKVEKGSK CSGLNDLSCI CTTKNSDVEK  60
   61 CLKEICPNGD ADTAISAFKS SCSGYSSQSS SSESESESAS SEESSASASA SASSSAGKSS 120
  121 NVEASTTKES SSAKASSSAA GSSEAVSSAT ETASTEESSS AAASASASAS ATKESSSEAA 180
  181 SSTSSTLKES KTSTTAAASS SESTTATGVL TQSEGSAAKV GLGALVGLVG AVLL

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	234	0.99