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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76573542
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENIGPNRSS ARQYLLITFL ITFVVSISTY LYCADYVSYN IWNSVTSKSN KPYISIKTLD  60
   61 LNDTQIDDLK RLGLTPKKSV EIVKPDNSKQ TIHGRFLHIT DFHIDHHYQK GSDIDKVCHG 120
  121 GEGKASKYGD AILGCDSPPI LVEETFKWIT DNLIDKIDFI VYTGDSARHD NDREYPRTRQ 180
  181 HIFNMNKEIS DKFVTLTSES DGQPLIYPVS NNDIMPHNLM DTGPSLQTRE LFEAWRPFIP 240
  241 QVQMHTYLMG AYYFQEVIPN QLAVLSLNTM YWFDSNPMVD DCDNKGDPGY KLFEWLGYVL 300
  301 KEMRARNMKV WLCGHVPPNE KNYDTTCLRK YIAWTHEYRD VIVGGLYGHM NLDHFIPLDS 360
  361 VQAYKSIQKD FKDEFKQKSV FSVEDEDDLA LEDSNLYKAL DENFSDKFFR VTGGVPNNKV 420
  421 TYLETLREEL YAPLKGKKKS GEHFERYSIA HVTASIIPTF NPGMRVWEYN ITDLEDKLQQ 480
  481 VKFEPWDKFF AGVERMIEVQ SNYVDEKDND EMNWQEMDDI TIERKKKHKK KNRKKKKDHT 540
  541 FPKPMPENLP LGPAYIEQTF TPERYVQYYA DLESINKGKK EFDYEIEYST DDSLYGLKAL 600
  601 TVEEWIKFGR KLGEPVKDLK NNVNKGKKKK NNGKKYKKLQ QIWNAYLKHA FISSDYEHKG 660
  661 YG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle