YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.227, orf19...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMKQPDDQK SEREREKKYR LIIFNSLLIL VNTIYFLSSN YPSHHPIYSI MNPQRIIELQ  60
   61 KHYQNTPKPL WLRGRQSAFL VYPFYALFAV STAIPLYYSV RAVAGIKDE

Type	Start	End	Confidence
Cytoplasmic	1	20	0.97
Transmembrane Helix	21	39	0.97
Non-Cytoplasmic	40	78	0.96
Transmembrane Helix	79	100	0.91
Cytoplasmic	101	109	0.91