YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.337
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKDIYIYMI NTNKDVSTPM VVFGEWDGFE NFLVLEQRKN YLKSIEGANE EAREVLDQMT  60
   61 IEVSNLPSNQ RSSYNAKIRN YRTELDTVTV TYNKLLDAQD KVELFGSNRY TDDSGDSSEQ 120
  121 RKQLLSNNSS LERSSQRLHD SQRIAMETEN IGSNILNDLR SQREQINGAR NTLSQADNYV 180
  181 DRSVQTLKTM GRRLTANKFI SYGIIAVLIL LIFLVLFSKF S

Type	Start	End	Confidence
Cytoplasmic	1	198	0.92
Transmembrane Helix	199	217	0.97
Non-Cytoplasmic	218	221	0.71