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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.260
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVKRPKKIF TRSQIIDLIA DGKVIVIYKN NVLNLTSWIK KHPGGDKAAY HMVGKDATDE  60
   61 MHAYHCDETV DTFTRFKIGE IEGPRWENLL PPIQGGIYAK GGHYGSLNNK NTSNKKTLDS 120
  121 KLDNDSSNST SDLECLTTTN SCDSAISETE IANYKGIGFV PSVKPVVPQN QLVTKSNMDI 180
  181 VFPIIDEETK KKVIRNPKTL LNNYDNKLSQ EDVMSLPALD YDSQQVLRDK YNELHQTIID 240
  241 YGLYECDLWD YVREVTKIGS LFLYSLSFLK INQLFLSAVF MGMAWHQGTF IAHDAGHIGI 300
  301 THNYQIDNIF GMLIADWFGG LSLGWWKRNH NVHHLITNDP VHDPDIQHLP FFAVSVRLFQ 360
  361 NVYSTYYDKI LPFDKFSQFL IPLQKYLYYP ILCFGRFNLY RLSWTHVLCG QGPRQGKAAW 420
  421 FRYFEFFGLS FFFYWFFYLL VFKTIEGGWN RFNYVMVSHI TTMLVHVQIT LSHFAMSTAD 480
  481 LGVSESFPSR QVRTTMDVDC PEWLDFLHGG LQFQAIHHLF PRLPRHNLRK AQPFVIKFCE 540
  541 EVGLSYSIYG FGEGNEIVIS RLADIGKQCS IFLDATKHYE GDLY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle