YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HUT1_CANAL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	20	0.93
Transmembrane Helix	21	42	0.93
Non-Cytoplasmic	43	61	0.86
Transmembrane Helix	62	82	0.92
Cytoplasmic	83	116	0.89
Transmembrane Helix	117	136	0.82
Non-Cytoplasmic	137	143	0.73
Transmembrane Helix	144	166	0.81
Cytoplasmic	167	174	0.74
Transmembrane Helix	175	194	0.95
Non-Cytoplasmic	195	203	0.72
Transmembrane Helix	204	222	0.84
Cytoplasmic	223	241	0.88
Transmembrane Helix	242	261	0.94
Non-Cytoplasmic	262	278	0.92
Transmembrane Helix	279	301	0.92
Cytoplasmic	302	312	0.75
Transmembrane Helix	313	332	0.88
Non-Cytoplasmic	333	336	0.77
Transmembrane Helix	337	355	0.90
Cytoplasmic	356	370	0.91

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTQKQHQQQ HHLQSGQEKN KALTLIICVC GLYGTFLTWS ILQERINTKP YGDNNEYFKA  60
   61 PIIINLIQAL FASIIGFIYN YVTTTTTSTK TTTKTKTKTN SNPFSIFFTN GKQNCNVLKF 120
  121 MILISITSSI ASPIGYKSLK HLDYLAYLLA KSCKLIPVMI VHFIFYQTKF PNYKYLVAGL 180
  181 VTLGVILFTM AHVTTKTKIN DGNTLLGLTY LIGSMILDGL TNSTQDQLFK LPLENKLTSG 240
  241 KLMSLLNLFI FIWTSLYTII FHKYEIDYTI NFINNYPELL IDIIGFAICG AIGQVFIFII 300
  301 LEKFDSIILI TATVTRKMLS MILSVILFGH HLSWEQWVGV GLVFGGIGLE AFIKFKQQSQ 360
  361 QKMKIKSKVA