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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PFA3_CANAL
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAILYKYPM ATNNNNNNGN PILRSLETSC CFLATLFPKV FCTLVLTWSL YVLLFIIPNY  60
   61 IKSSLNSTIL NIIGITLYVL CIISYYKIIL IGPGSPLDYP ELRINDLNRM INENPYNNNN 120
  121 NDEEPGDLPP ESMIIHTMKV NGNQGYRYCT KCSVWKPDRS HHCSSSGKCI LKMDHYCPWF 180
  181 STCIGFHNYK FFIQFLSYVA IYCWFLFIIS GKILYNFITE GLFEDEILSL NLVAVLILSF 240
  241 AFAIAVSVFA MFSIYLCCKN LTTIEFQEKR WNYRGQANDE RFNYEFDNNG KRKKINTNIF 300
  301 DLGIMENWKS VMGPNWITWI LPITVTVTAN TKSMISQDEF NNGVNFKVNE EIYAKYLHNA 360
  361 ELQQQLNQQL SSYKDRLRRE RQANIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle