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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6778, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNYNRTDNS KSNANPNPNA NPNNPFSDNA NNLIDLDLES NPYGDFNPNH VYPQTQRNTT  60
   61 TNTTTTTTTP HDPFADQFVL TDDSDEDNDD DDDVDGHNAH NTSFASSSQN RQVPLLNTAN 120
  121 IPKSPTNRFF NTHNTNNNEY INMTDKQETS RDFDITHIFR KLKSKITGKP ANLGLNDRQQ 180
  181 SHQQQQPREI NIMNHSANAG FGYYGNHIST TKYNIATFLP KFLFEQFSKY ANLFFLVTSI 240
  241 IQQVPHVSPT NRYTTIGTLI VVLVVAAIKE MFEDIKRANA DKELNRTKVL VLDPVTGNFT 300
  301 LKKWIKVQVG DVVQVLNEEP FPADLILLSS SEPEGLCYIE TANLDGETNL KIKQAIPETA 360
  361 HLVNPRDLVK DLNNAQILSE QPNSSLYTYE GNLKNFRRGP DIPLSPEQML LRGATLRNTQ 420
  421 WINGVVIFTG HETKLMRNAT AAPIKRTDVE RIINLQILAL FGVLIVLALI SSIGNVIKVK 480
  481 VDGDKLGYLQ LEGISMAKLF FQDLLTYWIL FSNLVPISLF VTVELIKYYQ AFMIGSDLDM 540
  541 YYEETDTPTG VRTSSLVEEL GQIDYIFSDK TGTLTRNVME FKSCSIGGRC YIEEIPEDGH 600
  601 AQVIDGIEIG YHTFDQLHAD LKNTSTQQSA IINEFLTLLS TCHTVIPEVT EEKINYQAAS 660
  661 PDEGALVQGA ADLGYKFTIR RPKGVTIENT LTGNSSEYEL LNICEFNSTR KRMSAIFRCP 720
  721 DGVIRLFCKG ADTVILERLS QDEPQPFVDS TLRHLEDFAA EGLRTLCIAS RIISDEEYNS 780
  781 WSQTYYEAST SLDNRSDKLD AAAELIEKDL FLLGATAIED KLQDGVPETI HTLQQAGIKI 840
  841 WVLTGDRQET AINIGMSCKL LSEDMNLLII NEQTKNDTRL NLQEKLTAIQ EHQFDAEDGS 900
  901 LESSLALIID GHSLGYALEP DLEDLLIELG SRCRAVICCR VSPLQKALVV KMVKRKKKTS 960
  961 LLLAIGDGAN DVSMIQAAHV GVGISGMEGM QAARSADVSI GQFKFLKKLL LVHGAWSYQR1020
 1021 LSNAILYSFY KNIALYMTQF WFVFTNGFSG QSIAESWTLT FYNVLFTSLP PFVLGVFDQF1080
 1081 VSARLLDRYP QLYQLGQKRK FFNVAIFWTW ILNGFYHSAV IFLCSFFIYR YMNVASNGQT1140
 1141 TDNWSWGVAV YTTCTLTALG KAALVVTMWT KFTVIAIPGS FLLWLGWYPA YATIAPMINV1200
 1201 SDEYRGVLRM TYPLITFWGM VFGVAILCLL RDFAWKYFKR RYNPESYHYV QEIQKYNIQD1260
 1261 YRPRMEQFQK AIRKVRQVQR IKKQRGFAFS QVEGQDQDKI VRLYDTTKKR GVFGELSESK1320
 1321 

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