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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6738, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNPRIQIY QCMFNFLFFF FTLLLLFCCS ILTKLNFFFF IFRFNKFTPK KHSDRVLIKR  60
   61 VLYTLVFLLV TYTIYSRVLT GDSRIPQSQD RQQSPTNDNN HEVYKVTKDG VYKQEVTGVV 120
  121 EEVEEEELKE VTTEDLYKSN VDIFDLNDYQ GSQEGAKNGD ILLFLMPLRN AEHVLPMAFY 180
  181 NLMNLTYDHR LIDIAFLVSD CSPDDTTLET VFEYSVALQN GTLVDKLKHE EELKNSGNVR 240
  241 GTSDLYQSYM EPSYIESVKK AYSNPESHHP NYRTPFRSVT IFKKDFGQVI GQGFSDRHAV 300
  301 KVQGIRRKLM GRARNWLTSA ALKPYHSWVY WRDADIETCP GDVIEELMSH NYDVMVPNVW 360
  361 RPLPTFLGNE QPYDLNSWVE SDAGLELAKT LNEDDVIVEG YAEYPTWRAH LAYIRDANGD 420
  421 PREVIDLDGV GGVSILARAK IFRQGVHFPA FTFLNHAETE AFGKMAKKMG FSVGGLPHYT 480
  481 IWHIYEPSED DLKEIARLER KKRRQKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle