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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2075, orf1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLQQLTIS ILLLFTASVQ SLDINVDDKD SICSAAKYVV QGIWNYYEGL KYGGTVGMFA  60
   61 PPNYWWNAGE AFGGLVDFYT YCQSDNSTLE KLIYNGMYHQ AGENYNYIPS NQSMTEGNDD 120
  121 QGVWGMAIME AVERNFTEPE SHSWLEMVQA VFNTMNARWD ADNCGGGLRW QIFTWNSGYD 180
  181 YKNSISNGCL FHLAARLARY TGNSSVYVDT AEKVWKWMED VGFLTEEDNG DVRIYDGAKI 240
  241 TNNCSSVTDL RWSYTYGVFM AGCAYLYNFT GDDVWLTRTN EIVQASLSYF FANKIMQETT 300
  301 CQPQNKCNND QRSFRCLFSR CLGLTTQLAP ETKDRIREVL EASAEGAAKS CSGGSDGVTC 360
  361 GENWAIDKWD GVYGLGEQTS ALEVMMALIV EPPLSVKTGG TNRTDYSAGT NSEDNANKNE 420
  421 LTITGKDKAG AGVLTAIVLA VILGGAIWMI F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle