YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238881918
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGYFESILP YTNGGKLPYW LLFISVVSIF NSVQTYQNIN LTKRVYEKNP NQVSPLSART  60
   61 FGTWTLITSI VRFYGAYYLQ NKQIYELTQF TFAIAAWHFL SEWLYFGTCK LGKGLSGPLI 120
  121 VSSVSLVWMY LQKDFYVN

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.81
Transmembrane Helix	17	36	0.86
Cytoplasmic	37	55	0.78
Transmembrane Helix	56	76	0.79
Non-Cytoplasmic	77	86	0.62
Transmembrane Helix	87	106	0.75
Cytoplasmic	107	113	0.60
Transmembrane Helix	114	132	0.77
Non-Cytoplasmic	133	138	0.67