YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COX16_CANAL
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYSGNRVFR GKKEQEAYDK TLAGRYVKLV KKNHFLFFGL PFLVSIVAGS IYLQKFTSVK  60
   61 WEKYDEKYQQ LGEEEMLNLI ENKRTVDKKN DYYRLQGLLN DHTNQVADDY EIVRVQRRKE 120
  121 DEPVWDRQ

Type	Start	End	Confidence
Cytoplasmic	1	33	0.80
Transmembrane Helix	34	53	0.90
Non-Cytoplasmic	54	128	0.87