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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6070, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTKENSNY ASGDTKERAN SDLSESDRST PPRDPNSTFQ AYRLTIDEVA QEFNTSIVDG  60
   61 LGAHDAENRI QAYGPNNLGE GDKISYPKIL AHQVFNAMIL VLIISMIIAL AIKDWISGGV 120
  121 IAFVVFLNIS VGFVQEVKAE KTMGSLKNLS SPTARVTRNG DDFTIPAEEV VPGDIVHIKV 180
  181 GDTVPADLRL FDCMNLETDE ALLTGESLPV AKNFEVVYTD YSVPVPVGDR LNLVYSSSIV 240
  241 SKGRGSGIVF ATGLNTEIGA IAQSLKGNSG LIRRVDKSND RKPQKREYGQ AAAGTIYDVV 300
  301 GNILGVTVGT PLQRKLSWLA IFLFCVAVVF AIIVMGSQKF HVNKEVAIYA ICVALSMIPS 360
  361 ALILVLTITM AVGAQVMVTK NVIVRKFDSL EALGGINDIC SDKTGTLTQG KMIAKKVWLP 420
  421 NIGTLDVQNS NEPYNPTVGD VRFAPYSPKF VKETDEEIDF NKPYPDPMPE SMHKWLMTAT 480
  481 LANIATVNQT KDEDTGELLW KAHGDATEIA IQVFTTRLNY GRESIAQEYE HLAEFPFDSS 540
  541 IKRMSAIYKK DGETRVYTKG AVERLLGLCD YWYGERTEDD YDSQTLVKLT EDDAKLIEEN 600
  601 MAALSSQGLR VLAFATKELG DADMNDREQV ESHLIFQGLI GIYDPPREES AQSVKSCHKA 660
  661 GINVHMLTGD HPGTAKAIAQ EVGILPHNLY HYSEDVVKVM VMSANDFDAL TDDEIDNLPV 720
  721 LPLVIARCAP KTKVRMIDAL HRRKKFAAMT GDGVNDSPSL KKADVGIAMG LNGSDVAKDA 780
  781 SDIVLTDDNF ASILNAIEEG RRMSANIQKF VLQLLAENVA QAFYLMIGLA FLDETGYSVF 840
  841 PLSPVEVLWI LVVTSTFPAI GLAQNAASDD ILEKPPNNTI FTWEVIIDMF AYGVIMAATC 900
  901 LLSFVIVVYG AGNGDLGIDC NATNADKDLC SLVFEGRSTA FASMTWQALI LAWECLDPKK 960
  961 SLLLIPFSEL WANQFLFWSI VGGFVTVFPV IYIPVINTKV FLHKSITWEW GVAVGTTALF1020
 1021 LLGAEAWKWG KRVFARSSKA KNPEYELERN DPFQRYASFS RANTMVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle