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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SVF1_CANAL
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKWVQSGLS AVAGTAEPEY GPDAIQPITK RIFDTNNGKI YRATEPKDFE WLSPNYTNVE  60
   61 TQTFYFTDLS NGNIGFAQII HSNVMGLTTT AQFTFRLYNV KDKSINLWTS TKLEDFEIKD 120
  121 SNFYAKDLSL ELKDNKVYKL KSSVNKESIV EFEMERLTDG VIFGDDGMSF YGEDPEQPWG 180
  181 SMRHVFWPRC KVNGTITTAD NKVIEINNGL TMFVMALQGM KPHHAAKSWN FMNFQSANHS 240
  241 AVQMEFTTPK SYGTTKVNIG IVTDNEKILI ASIDNQVVHS DTKFDDVGGW DVPQKIEFNY 300
  301 IDGKDKDKQV ASVSGNLSQL VERVDVMAEI PQFVKNIVSG VAGARPYIYQ YANEFTIDIN 360
  361 NGDGEKVKED GVGFTEVTFI SD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle