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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.13487, orf...
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPPSKIDES FTDIGNTSTS WYTEIKSIEP GVKHLTDSFF TKQKTHDIQF RLNQLRNLYY  60
   61 AVQDNVDALC EALSKDFNRS ASETKNLEIV GGLNELVHTI ASLHEWVKPE KVTDLPITLK 120
  121 SNPIYIERIP LGVVLIISPF NYPFFLSFSA VVGAIAGGNA VVLKQSELTP NFTRLFSEIL 180
  181 TKALDKDIFL AVNGGIPETT ELLNQKFDKI MYTGNNTVGT IVAKKAAETL TPVILELGGK 240
  241 SPAFILDDVQ DKDIEIIARR IAWGRFTNAG QTCVAVDYVL VPKKLHDKFI TALKKVLNEE 300
  301 FYPKLDKTDK TYTHVIHDRA FTNLSKIIST TKGKIIVGGE TDPETRYIAP TVIDNVSWDD 360
  361 SSMKGEIFGP ILPILTYDKL TDSLRDIIRN HDTPLAQYVF TSGSTSRKYN RQLDQILTTI 420
  421 RSGGLIVNDV LMHVALINAP FGGVGQSGYG SYHGKFSFRS FTHERTTMEQ KLWNDFMVKV 480
  481 RYPPYNSNKD NLVRVSQQGY NGKVWFSRTG DVPVAGPGRF FSSWNSFAGV IGLLTEFITN 540
  541 KQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle