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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.13466, orf...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLKPISFRW SKTSVRSVPN PFMYGPDNLN KPLSRASQMA ERVHQQTPSS TNYQQRRYFS  60
   61 YYYYQFPKIP RPKRNMLYYS TWSRNPVTNA SNANKPSKRH MLPFGSFKIS KRSFANANQK 120
  121 LKTKLKKLKM GKERRRFIRW WTVTSLTIVL GGVYAKIKYE RGDHEENPYK IRPQSWHLYA 180
  181 YSALPLKTIS RLWGQVNSIN LPVWIRSPSY RVYSAIFGVN LDEMENPDLS SYKNLSEFFY 240
  241 RDIKPDARPI ADGDLVSPAD GKVLKFGVVE NGEIEQVKGM TYSIDALLGI DTGKLAAPTH 300
  301 SLNFDYNSDD ETIVKRDEEF AKINGISYSM DDLVGGNSKS TYHMNELTYK DEHDGTAAGE 360
  361 RASFSKELRV AEELTPNPVE YFRKKNLYFA VIYLAPGDYH HFHSPTSWVT TLRRHFIGEL 420
  421 FSVAPFFQKT LQGLFVLNER VALLGYWKYG FFSMVPVGAT NVGSIVVNFD KDLKTNDIYE 480
  481 HEVYSSASSV NESTPLLDQK DYSANDILTI TNSEYEDKKR KKLRKNTVYE ATYTNASRLL 540
  541 GGYPLSKGQD IGGFKLGSTV VLVFEAPENF KFNLKVGEKV KVGQSLGGFV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle