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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6037, orf1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFPVLYLFG IFVLSIQAHT VPGLDSLSLQ ASLAKRGNLI DSIYNELSDA ETDFIGTHLK  60
   61 NLTNYNATKC DQCKFRIRYG RSLIEEYPDK SHLVSLLLFK HCLVINNNTE SKCDNVDFFV 120
  121 STDSKNFQKF NDNFDSGIKQ VGSVNFFDND FLHMLKNFNV SSDLDLEYYC YFKGKGACKM 180
  181 PATKDVEELW GISKWWPEKK PEHYSEPKYK NNSEVFNVLH FSDIHIQLRY NVGAEANCTN 240
  241 LPCGAPDSYN KQLLPSSYNF SSYYQHFSPN VAKMEFSFYP DAHYDENSQY IKGDYYDFPL 300
  301 YRGWNFKNAP ATSFGGYLTD SPAVLMNSSL ISMAKMHKEK NFEFAIFTGD VVDHLLLSCT 360
  361 PEYTKEEEVK SFKAMKFFFN NLTVLPALGN HETGEYGQLS PIAYDFNGSY SWNQDEMVDL 420
  421 WINNEWFPAK DRYDLKSHYA GFSYVTNRGL KVIGLNSNAY YQKNLWSYID LSTNPDLFGQ 480
  481 WEFLVNELIE SEEKGQRVWI MAHIPTTDYD TLPLQSRIFG KIVERFSPYT IANIFFAHTH 540
  541 MDQTHILYST NSSKEAEDII NMSWVMQSVT PLANYNPSWR YYEVENESFN IINSFNYMTK 600
  601 LNDTFVNGGE EPVWEFEYSA RELYDPKKTW PERAPLNATF WHKYVFERLR NESDIEFNQQ 660
  661 YSNIRYRFGP GVPDCKNGSV ISDTCYNENY CVVGSFYSDD YQACLRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle