YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.6026, orf1...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLLVGIIP IALYAIFNYL FYTWLPTNYL FDKQVLQELV QETLKDHPDG NATAIMIDLT  60
   61 PKIQKKYPKI INDLNFDDWV YNNAGGAMGT MFILHASISE YLIFFGTAIG TEGHTGVHFA 120
  121 DDYFTILTGE QRAAYPGALI PEVYLPGDQH HLPKGHVKQY AMPGESFALE LAQGWIPAML 180
  181 PFGFLDTLTS TMDFYTFYLT AYYTGKDMIK NLLIGKF

Type	Start	End	Confidence
Cytoplasmic	1	4	0.71
Transmembrane Helix	5	25	0.81
Non-Cytoplasmic	26	85	0.83
Transmembrane Helix	86	105	0.66
Cytoplasmic	106	217	0.60