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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6214, sp|Q...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANSSFFLA DNCAPHNQSF IQFCIHAASK KKGRIALMCL ANLFLLFSFH LLYARFCSGF  60
   61 PYVVPSTARS TNQIFHTNLE QLVNSPENKQ IFSQLKFSDQ AFYDPHDNVV GTTEFPVFNQ 120
  121 YQRQPYVANG YIGSRIPNLG QGFTYDQLTN SSTANDDDLL NGWPLFNKRY SGAFVAGFYD 180
  181 LQKNTTGTNF AELLENGYES VIAAVPQWTA LSLSVEILGK KYTLDPSLEH EAIGDITNYV 240
  241 QNMSLSDGIV TTQFTWLNTF DVKYEILAHR ENINLGLVNM QVYNPGNESV QVIVSDVLDF 300
  301 NSSQRCQLNQ ISHDKNGIYV TFHPQGLSYI DGAIYSTLSA NGQITREQTN ETVFQNVELT 360
  361 IEPHSCVQVA KYAGIATTDL DPDSFKTADD VLKFARKVSQ NKKHGDATQL VNSHRSAWSK 420
  421 IIQDAPLVTF PSDSLLNLGA RASIFHLLAN TRPNAEGVTG ALGVSGLSSD SYGGMVFWDT 480
  481 DLWMLNGILP FAPDHIKSFI NYRVHLHQQA IDNVPRGYQG AVYPWTSGRF GNCTGTGPCL 540
  541 DYEYHINMAV AMASWQLYIS GAADDTFLES VAYPIINDAA SFLAEYVVHY NDTLGKYTTK 600
  601 NLTDPDEFAN HVDNGAYTNT GIVLVMRWAQ IAGSILGKQV PKIYHDIETA MFLPTAENTQ 660
  661 NITLEYSGMN SSVGIKQADV IMMTYPLENE LIDQDQAYIN MEFYSMKQVG YGPAMTFPIF 720
  721 SIVASNLAFT GCASQSYLHK AIQPFLRGPF AQFAEQNNDD YLTNGGTHPA FPFLTAHGGF 780
  781 LQAILQGLTG MRFDYTFENN KLQRLLKLDP IALPCLGEGV RFDSIKYDNH TLSMAINETH 840
  841 FTIKNKGKTT PNARNYVTIL LAERNAMHGK YTINDEDEQS FPLFETSESF PDSISECNKA 900
  901 GFFNITEGAY GDVSISINDG DNTTSWQAKY NDTTGKVLVD LKSFRNISSG TFIWGDKPPK 960
  961 RVKVSKYSGS SFTAVTDFFA QVDFGNELFN EYKYANPEGK LHNQSDVFEE VYSGDVKISA1020
 1021 PFDPEEYFQV WVPTRHNITE VAVNLQTRFL LIEVDEIHNT EAIDGDYGGA KLAEVVFY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle