YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.7503
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITWLVFYLM LTIPMINGSD LSLRLQSKFM PTSFSPRNIF DTHGPATINS NKEDSSSSSG  60
   61 GGGGSGLPPS PMQFPPKLPF PKWLSDFTGL HEWPDLDPPY IPLDFIDFNK IVNIPIHKQG 120
  121 QCHDTGSNNN NNLTPLSILR TPKACSFDCF NCVEIDDVYT CPKLSQTFDD GPSTSTLKLL 180
  181 QSFNQTGLKT TLFTLGVNIV RFPEIYQQSH FMGHIMGSHT WSHKFLPSLT NQEIISQIEW 240
  241 SIWAMNATSN HLPKWFRPPY GGIDNRIRSI LRQFGMQAVL WDFDTFDWKM LGGGGGATSN 300
  301 IRKEEDVFSE VEKFKLTKNN KGLILHHDAI QKTVDVGIMI HEKLLNHDQL TVPLCVGGID 360
  361 YIKTFPK

Type	Start	End	Confidence
Signal Peptide	1	18	0.68
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	367	0.98