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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.7472
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLQKFIIT VALLTNIVFA IDITENKVDR GSVTLSFGEI IIHPGASWSI IDNAFSNFIG  60
   61 KLDVKAKSAL YISSTSHLLA LQVSLTTLLH SINNSGIISF DSRVSLTPSS YDLRGLSFTN 120
  121 SGEMYFAASG RVPSTMSLTS ASWTNTGLLS FYQNQRTSGA VCLGFPLGSI TNSGKICLNN 180
  181 QVYQQTTQIK GSGCFSANGD STIYIANVLL SVSANQNFHL VDKDSSMIVQ AISTTQTFNV 240
  241 YGFGNGNKIG LTLPLIGIIL ESAHSYDSST GILTLRNFLL EQRFNIGLGY DSSKFSVVTD 300
  301 SGSGIPSTIW GSVTYTGRVP TRALPKSCQM ACKPIPEAPG VKPTDYTTTI TKTNTAGNTV 360
  361 TETGAVTIST DKSGSWFTTT SIFPTLTTAT STSITTTLSN EAHIKTTDNT LAKVSSTVDY 420
  421 ISAPISSSEF ISLESFVDET LSNENPISTS TDYASENSFA ISESTFITAS DFQATESLVT 480
  481 ESYFSKSQSS DSESFVINTS SAVDNSYVSS SSSAGGSSFP EETHMLQTSD SDLSSTAGSE 540
  541 SDVTEFSDVS LATASDSSIA DKSIGTESLY SEISLVSASE STGSIGELSI SGDTLLKTAS 600
  601 ETKFVKSSFS SDLISETSSE LFVSSSVSTD MILETANDSF ITSDKVVETP SYSNELAFET 660
  661 VSETIINSFV SSESSLNTAS NSLIASKPST DSSSYTTDID FETTTKSFAE SPSYFSETVS 720
  721 EIASKSSLSM VEPSCWSELP FETSIESLIA PSYISSEPAP ETASESFIVK PSYSEIASES 780
  781 ITKSIISTIE ASISSDIFSD ATTGSIVVQP SVSSGISLEI PSESMLFSES SISKPFISSQ 840
  841 SIHECTSDSI LVVPSFFSSD VSFETVEYSS TVSTSVDAEP SYSSEISLKT PSESFIVSET 900
  901 FLEPSYSGEV VLATPSESVV ASETDVNKPS YSNEAVLQTP SESYILSETG VKESSESSEF 960
  961 ALSTPSTSFI ASETFTVQSF ASSEVSFGSD RESTISTEAI QVEPSISNDV VLETASESFI1020
 1021 SKAPTTSEFT ILSETSIVEP SILSDLRFET TSQSTEMAPS ATGVSYFSST ETPLASSSSY1080
 1081 ESSFATSSVS AIQSINSQVA SASFVSADST DSSEVGSSYT TASAFGPASS ASEEKFISVW1140
 1141 ETSNSGGSFT LESSTSVASV VTTPLPFTSN DIITEISSTW NGAKSDSPHT SESDITSQYN1200
 1201 SHSTSVATRS DSISLTDTFE IGFASTWTTG GSGNGGSMKS DVSNQDSYAT MLPTSFLDTS1260
 1261 NSDITTGVVS TWDAKNSNSY TSAELSTDPY SSDGYASSAT AALSITESIP TTDTINTEYH1320
 1321 SNGDITTSGG FKEISLTSHY EGGFTSESAG YTIASPSGST QEFATATITS CFESKCSENV1380
 1381 VTYISSVSHS TVTTGYEDTR FTGSIFSGDL ASTGDNIVSA SGRSVTDATN PFATNTDIGT1440
 1441 TSTVSLYGDL NDSDSSVSGY PTNRSDSNGY ANTPTTGSNT SGDFSQTIET GSSSFTAIPF1500
 1501 ENGSTNISNK YLKFLGTVVS ILILLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle