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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.7469
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNSVIGQLK NFLTALNLLS IHSSRKEIFF FLNYKRDSKN LLNENFIYLF FFSFFSFLLF  60
   61 LFHSIYTHTY TQNTNRNMSK GKVCLAYSGG LDTSVILAWL LEQGYEVIAF LANIGQEEDF 120
  121 EEAEKKALAI GATKFVVVDV RKEFVEKVCF PAIQSNAIYE NVYLLGTSLA RPVIAQAQIK 180
  181 VAEENGCFAV SHGCTGKGND QVRFELSFYA LKPDVVVIAP WRDPEFFQRF AGRKDLLDYA 240
  241 ASKNIPVAQT KAKPWSTDEN LAHISFEAGI LENPDTTPPK DMWKLTVDPT DAPDKPETFS 300
  301 VVFEKGLPVK LILDDSKKEI TDPVELFIEA NSLARRNGVG RIDIVENRFI GIKSRGCYET 360
  361 PGLTILRNTH VDLEGLTLDR EVRAIRDQFV TPTWAKILYN GMYFTPEGEY VRSMIPPSQV 420
  421 TVNGVVRAAA YKGSVTILGR SSDTEKLYDE TESSMDELTG FSPEDTSGFI AVQAIRIKKY 480
  481 GEAAREKGKP LDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle