YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.2516, orf1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKLLSIITT VLYFFTFLVS SYTTSNIIQA NDNNLQSLIK TRGKFSFVDF YADWCRHCKK  60
   61 ISPIIDELSE LFIDYPEIQI IKINGDKDGK KMSKKYVDIG YPTLLFFYDD GRKIEFDGIR 120
  121 DLTSLSNFIQ QLSGIRLNES KSTDNNEEEE EEKKEKKESS SSGSSSNVND ADEETNKLIE 180
  181 LTPENFDEKV SQSPISIVSF GASWCKYCQE LDTALDKLAN E

Type	Start	End	Confidence
Signal Peptide	1	21	0.86
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	221	0.98