YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.3340, orf1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSIRSSSRV LLKASSATTR ATLNAAASKT FTRSKYSLPE LDYEFSATEP YISGQINEIH  60
   61 YTKHHQTYVN NLNASIEQAV EAKSKGEVKK LVALQKAINF NGGGYLNHCL WWKNLAPVSQ 120
  121 GGGQPPSEDS KLGKQIVKQF GSLDKLIEIT NGKLAGIQGS GWAFIVKNKA NGDTIDVITT 180
  181 ANQDTVTDPN LVPLIAIDAW EHAYYLQYQN VKADYFKNLW HVINWKEAER RFEF

Type	Start	End	Confidence
Signal Peptide	1	25	0.88
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	234	0.99