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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.3329, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEGVQFAAA TNLKSRNKQG NGTAAESPSL SPQISDHSND AGNKSNNHYK ERLSPFRYKL  60
   61 RSLILPLIRQ ETIYLAKMQS FLRCSVFDFY FAWTANLASH TFYVLMLPPP IWFGGSYLTR 120
  121 DLVYVLGLGI YLTGFLKDFF CLPRPRSPPL HRITMSSYTT QEYGFPSSHS ANATGVSLLL 180
  181 LIKILSLENV SNTTYYSLIV GLSLYYISLI FGRLYCGMHG FLDIIIGGLV GSFVFLFRHY 240
  241 FGLQWDKLLF DNGLGLVAST VIIIAVFVSL IHFHSEPVDD CPCFDDSVAF VGVLIGLDLA 300
  301 HLVAYQTKYF AKMNLTGNPY LIPFDVNRGV LNSVSRFLLG VALVVTWKTL AKPIVFTILP 360
  361 PIYKAVGVYL PRRSYISTAH TQTSTRKIRS TSMSNDSNMG IGDINNFIKG VTDHNKKDEV 420
  421 GPETEIDYYE MLSYSQNQNS DNTTIQTPPK YNSGVFKYRY DVEIVGRLII YAGISITAVW 480
  481 TFAFASDYLN L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle