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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.2565
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYDHLPRILK WSICLAIVFW YINQNSILFV LSIISGIILL CLVMVYYTTK VQISRSPPIQ  60
   61 RRHRRFNFTL SKHWKQEITQ LQNEQIEVKR PIFSESFLIS ESLQRFIDLI IQEFISPWYT 120
  121 QITQSAQVQT DISLEFKEVI RNLQNRAKSI DFAQLLVSNI LPLLQEHFED YLRAEDIIKS 180
  181 QGKFSKFDSN EYHIAVASQF RRGKLHPAVT TSLTVNEETN FKEKQYLRKK MKNVLELALS 240
  241 ENEKFNDVGI SLVTEILACT VLCNVVNLLT ESDFYNLIIV KLIGDNLRRR DQVKQLRAAL 300
  301 EEHTQKCSKE IDDNKVQVPD MASALLTPDS NLQNQLKLKI SERKQQREKQ KSLNLKDILT 360
  361 DKNNFQVFKE FMESEGRSKL VEFWKTVEMI KAPLEGEEND DETDPLALSL EFGNNDDVYN 420
  421 IYTKFIKTNE IPQPDTHIVE VLSNSGNSAN VRTYQEARTY LFKMQRDCFD QMQSHDLPVF 480
  481 VNSDMYLRLV SPKESSEVNP DVINAVENAF TLIMNKPESL DTRFDGSDEF NSDQLLTTLQ 540
  541 LKSDLFGESS TTLSDGNHSN RNSRLFDDFL SDDDQSDSDG DSLYLDKHSQ SMNNSNSEVQ 600
  601 FAAPGNLNLA EEILKLSDEV DNLQKQITIL EPLLRKAELT NNLSELKVLQ KSKIGLIREI 660
  661 NIKELQKQQF IVQENDNSLF GKSRVCIQSY INDNEKNGRE FTLYIIEVQK FSNENPNIVK 720
  721 AGWVVARRFS QFYGLHEYLK SKYHRVSYLK FPKKSISVLK FQQKQVAEIR MKQLEDYLQE 780
  781 LIKIQEVCSD RAFRSFLSSE NFNLKKNQRF EETRAKNYSD TNFQSLFGSK WYRGISNFMT 840
  841 TTKNDENHKD STYIDTHIME NLRDMESELK QFDEAASART PFVKPICDLL ISVFKLHNSR 900
  901 SWLRGRALVV ILQQMLGTTV EKKVYDVVEG RLKSEENVLD LIMMLTNILF PNGKFKDPPV 960
  961 IRSLYQQSNT RQEAKVLLEI FIFETCSTIF GRHNSIFAST EIFSMIQNEY LNRNLVFEIF1020
 1021 DEILEHMFVE MK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle