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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.5759, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEDIGSSS SSLQEYVGQQ QHNKIQPSTD DDYNEDDYES RRLHLVRTVS SINHHNFDEK  60
   61 FDTISREISR QVTNKEGEFQ LRLDEFNLAK ILANFVYFAK KQGIVLRKSG ITFQDLCVYG 120
  121 VDESFAIAPT VTDLLKGPVG AVQAILSQMK TPPRKILKNL NGFAKPGESV LVLGRPGAGC 180
  181 TTFLKALSGT DFDLYKGVTG DIRYDGLPQK EMLKLFKNDL VYNPELDVHF PHLTVDQTLT 240
  241 FAIACKTPEM RINGVTRDEF INAKKEILAT VFGLRHTYHT KVGNDFVRGV SGGERKRVSI 300
  301 AEALACNGSI YCWDNATRGL DASTALEFAQ AIRTSTKLLK TTAFVTIYQA GEGIYETFDR 360
  361 VTVLYDGHQV YYGPANKAKK YFEDMGWECP PRQSTAEFLT AITDPIGRFP RAGWENKVPR 420
  421 TAQDFEHYWL NSPQYQELMQ EIKDYNDEID EDETRSKYYQ SIQQEKMKGS RTKSPFTISY 480
  481 LEQLKLCFIR SYQRILGDSA YTITLMFASV AQAFVAGSLY YNTPDDVSGA FSRGGVIFFA 540
  541 VLFMSLMGLA EISASFSSRP ILMKQKNYTM YHPSADSLSN FVMSIPISIF INTFFVIILY 600
  601 FLSNLARDAG KFFICYLFVI MLHLTMKSMF QAIAAINKSI AGANAMGGIL MLASLMYSSY 660
  661 MIQRPSMHPW FKWISYINPV LYAFEAVIAS EFHGRKMQCT SQYLTPSGPG YENLGAGEQV 720
  721 CTFIGSVPGQ SWVLGDDYLR IAYTYRFSHV WRNLGILFGF LAFFLAIATL GTEYVKPITG 780
  781 GGDKLLFLKG KVPEHITLPS EKKEEDIESG GNSDTTATSN GTLSQGKSEE KAAIADDGLK 840
  841 AKGVFVWKDV DYVIPYEGKK RQLLQNVSGY CVPGTLTALM GESGAGKTTL LNVLAQRVDF 900
  901 GVITGDMLVN GRPLDTSFSR RTGYVQQQDI HFSEVTVRES LQFAARLRRS NDVSDAEKLE 960
  961 YVEKIIDVLD MRGYADAVVG RLGNGLNVEQ RKKLSIGVEL VAKPSLLLFL DEPTSGLDSQ1020
 1021 SAWAIVKLLR DLANAGQSIL CTIHQPSATL FEEFDRLLLL KKGGIVTYFG DIGPRSRTIL1080
 1081 DYFERNGARH CDDKENPAEY ILEAIGAGAT ASTDFDWGEI WAQSPEKVQT DAKRDELINE1140
 1141 SAKNATDTSA TDSPSEKNLT SKYATPYWYQ FRHVTHRTSL IFYRDPDYIA AKVFLMTIAG1200
 1201 LFIGFTFFGL KHTKTGAQNG MFCAFLSCVI AAPLINQMLE KAGSRDIYEV REKLSNTYHW1260
 1261 SLLILPQIIF EVIYMIIGGT IMFVCLYFPT QVSTVASHSG MFYFSQAIFL QTFAVSFGLM1320
 1321 VSYVSPDIES ASVIVSFLYT FIVSFSGVVQ PVNLMPGFWT FMNKVSPYTY FIQNLVSSFL1380
 1381 HDRTIRCNAK ELSYFNPPSG QTCKEFASAF ISRNGGYLVD EGATSNCGYC NFSNADQYLL1440
 1441 TIGAKFSYRW RNIGFFCVYI IFNISVCLVL YYFLRYRKVS FNVTGLVNKF KKSKK

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