YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.3259, orf1...
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIRQQITQF LSLAYVFSSA FMLWKTLSVI ANSHSPIVVV LSGSMEPAFQ RGDILFLWNR  60
   61 DHQQKVGDIV VYEIDGKSIP IVHRVLREHH NSEKQLLLTK GDNNAVDDLS LYAKKQQYLN 120
  121 QKQDLVGTVK GYLPFIGYVT ILISENVYFK YGMLGLLGLS SLFSNE

Type	Start	End	Confidence
Cytoplasmic	1	9	0.41
Transmembrane Helix	10	29	0.45
Non-Cytoplasmic	30	166	0.81