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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.10753, orf...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLADLGSRL RGALSSVESG SDDEIQQMIK DICSALLESD VNVKLVAKLR GNIKNKIDES  60
   61 NVSKETSAMN KRKKLQKIIF DELCALVDSN VEPPKPKKLS TSTKTINGKK VRLSKESSHV 120
  121 IMFVGLQGAG KTTSCTKLAV YYKKRGFKVG LVCADTFRAG AFDQLKQNAI KANIPYYGSY 180
  181 LEPDPVKIAF EGVQKFKQEK FDIIIVDTSG RHRQEEQLFT EMVQIGEAVQ PTQTIMVMDG 240
  241 SIGQAAESQA RAFKESSNFG SIILTKMDGH AKGGGAISAV AATKTPIVFI GTGEHVGDLE 300
  301 IFKPTTFISK LLGIGDIQGL IEHVQSLNLH QDEGHKQTIE HIKEGKFTLR DFQNQMNNFL 360
  361 KMGPLTNIAS MIPGLSNIMS QVGDEETSKK IKNMIYIMDS MTIKELESDG RIFIKEPSRI 420
  421 VRVARGSGCA VVEVEMILQQ HRMMSTMAKS AMAAQGGQPG QPGNPMANNP QMQRMMQQAQ 480
  481 SNPNFMQQAM NMLGGAGGGA GGAGGLAGMM NNPAMMQQAQ QMMRSNPQMM QQAQQMMKNP 540
  541 GMMQKMMQQF GGMGGM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle