YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NPC2_CANAL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSFKNLAIV TLAVTTTSVE GISFSNIYLN KAITIFKNPT SLIPSFSNSK SINYQNTKPI  60
   61 PGDSPIEVCD ASEKQLLHLD EVIVTPNPPV AGQNLTFTAV GTLDKTIEEG AYVEVEVRYG 120
  121 FIKLIHQTYD LCEEIVKVDL QCPIKSGKQT ITKNVEIPEE VPPGKYLVVA RAYTKDDEYI 180
  181 TCLTATIIFP VQ

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	192	0.99