YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.5455, orf1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTNKRIAL PARVEPKVFF ANERTFLSWL NFTVILGSLG VGLLNFGDYV GRISAGLFTF  60
   61 IAMLTMVYAL VTYHWRAKAI RLRGSGPYDD RFGPTMLCIF LLVAVVVNFI LRIRA

Type	Start	End	Confidence
Cytoplasmic	1	25	0.87
Transmembrane Helix	26	46	0.91
Non-Cytoplasmic	47	52	0.74
Transmembrane Helix	53	75	0.89
Cytoplasmic	76	91	0.88
Transmembrane Helix	92	113	0.91
Non-Cytoplasmic	114	115	0.86