YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KMO_CANAL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.40
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEESQKTI GIVGAGLVGC LAALAFAKKG YDVTLFEYRP DPRTVDSSKR NLRSINLAVS  60
   61 SRGIRALQYV DPAMADRILE HVIPMKGRMI HDITGTKQES QVYGLNGESI NSIDRSFLNN 120
  121 CLLDELDKSN VKILFKHKLV KLDTSNACRM TFIDGHNDAK TSTFDFVVGC DGAHSQFRYH 180
  181 LQKTMRMDYS QKYIDMQYLE LYIPPSEDAN NKFSIDANHL HIWPRHNFML IALANKDGSF 240
  241 TSTFFSPWSV IEGISSSQEF VEFFRHNFPD AVGLIGEDAL SSAFKSNPRG SLMQVSCYPY 300
  301 SNGKGIILGD AAHSMVPFYG QGMNCGFEDV RILMELIDTN NGDIEEAFKQ YSAARKNDLD 360
  361 AICKLALDNY YEMSSKVVDI GYLIKKKLDY TLGKIFKNKW LPLYTMISFR DDIPYAKAIE 420
  421 IEKRQNRIMN NVGLGVLGTA AVYGLVKLGQ YWNRRQ

Type	Start	End	Confidence
Signal Peptide	1	27	0.76
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	456	0.95