YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EST3_CANAL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRSVSLSSL IPFLIIVSIA MQRPENDVPM IMQSSWLVNE VIKSINSNGQ YINALIKKDF  60
   61 QPTVLPVSFI LRILKFTATT DSKDITAVLA DSTHKIFAIF LFFPAIVDFE NKYHHRMTYN 120
  121 TRSCLIRIHK ANLKFMDKST VKKCYGRKSD GGLAIAVLEV LEFDIFFKDQ YSFINSIENR 180
  181 LKYVYDDVEY NQLCGKKKHK PEYEDLMCDI

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	210	0.99