YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.8121, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSEYNYDE SGETWPFFVL ALLSFILLPL TIKYISRVFT NTNPTKENQS IVGAIQENSE  60
   61 TLKVPNLSEI KSFQSKQKSS KIFNKTLIFL LIGWSIVIYV AKYVTKEADL TVLFDPYTIL 120
  121 DVSFTATERE IKSHYRKLSL KYHPDKLPKD LTEEQRSQAE QAYIRLTSAY KALTDEVTRE 180
  181 NFLRYGHPDG EQPATHGIAL PQFLVEGKYS SLVVVLYFMV IGILLPFIVG KWWSNVKSHT 240
  241 RKGLHVDTAA NFVRKFTDRD PAKVITPDVI LDYVLESEEI RQEFPNASHA ELKDLVYRYL 300
  301 NRQFDSDPKV EKKKVDLIAR LPFLINGLID IAIVFRLHET IFAAEDLKKS IIQAVKPTGR 360
  361 YQELLQLPYV DPEIVSKQSI RKLGKLFAIS KDEAKKALGI QSDEHLERAL NVAQHIPTLR 420
  421 IIDAEIKVPG EEDGAVHPNS QGHISIKFLV KSPKLKSCPD IEDERLKDEE TLEYMKNPLI 480
  481 VNEQQKKLPY SYAPYFPQPI RNSWSCYVIG QKENRLLEDS TNYVLENIDL NNLELSQEAW 540
  541 IKGTDVRIGT YKIQLPGAIG NVGNYYYRLV MKNNAYFGCD VDIPIDLEVT PVSIGKSLAG 600
  601 LKKKFDEEDE SEDSESDSDI SDPEEDSLAG AIAALRGSDL KKKKSSKDEV EEESEDEEVF 660
  661 TDINTDTEDE GDN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle