YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.11324, orf...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEETVTPEP EIVKISVFTP LIYVGVVLSI FITFSIIYRK RRLQSLTKVE PLFKENYTAV  60
   61 LYQHLKDQYT NKDLPKDQRP HEKVMKAALL RRAVEAIRRS MKLKENEPVF NKLYQNGLIG 120
  121 DDIFKQYQIQ IKFQELELKD IVTECETYKK GWVQTFFPLA QEICFNEALR RRLKASDDRA 180
  181 ETFSKLWETY ADKSEKSLES AKKVESKKTV EAVKAEETKD KVAEISEKVE DVKEEKEQEQ 240
  241 EADEKHQGGD NDSSKSKKKK KNNKAKKN

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.52
Transmembrane Helix	17	38	0.91
Cytoplasmic	39	268	0.54