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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.3829, orf1...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.61
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSLIKSLVT FATLFSLTLA KFESSTPPVE VVGNKFYFSN NGSQFLIRGI AYQQDAAGSV  60
   61 SSGYDADPNR KYNDPLADAD ACKRDVKYFK ESNTNTLRVY AIDPDKDHEE CMKIFSDAGI 120
  121 YIVADLSEPT VSINRNNPEW NLDLYKRYTK VIDKMQEYSN VLGFFAGNEV TNNRSNTDAS 180
  181 AFVKAAIRDM KKYIKESDYR QIPVGYSSND DEEIRVAIAD YFSCGSLDDR ADFFGINMYE 240
  241 WCGKSTFETS GYKDRTEEIK NLTIPAFFSE YGCNANRPRL FQEIGTLYSD KMTDVWSGGI 300
  301 VYMYFEEANK YGLVSVDGNS VKTLSDYNNY KSEMNKISPS LAHTSTLSSS DASKTLQCPG 360
  361 TAASTWKAAT NLPPTPDESY CDCISKSLEC VVADDVDKED YGDLFGQVCG YIDCSAISAD 420
  421 GSKGEYGVAS FCSDKDRLSY VLNQYYLDQD KKSSACDFKG SASINSKASA SGSCKAVSGV 480
  481 ATGKASSSGG SSKSGSSSAS TSGSSSSSTS SGSSSSSGVK ATQQMSMVKL VSIITIVTAF 540
  541 VGGMSVVF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle