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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.3802, orf1...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.31
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGYSTGVS PFDLDENNHN DSIHHRHQNH HSQSHDSSGE RDDTEIEDII QKTSKLNINT  60
   61 STSTKIKNFF FQSSNRHDSS NSPPLREVFI KTINPLILTA ISSFVRLYRI DVANSVVWDE 120
  121 AHFGKFGSQY LKRQFYFDVH PPLGKLLIGL SGYLADYDGN FDFESSNVYP DNVNYVFMRI 180
  181 FNCFFGILVT PLAYKTAVIL GYNQFTCWLI AFMVIFEQLS LTLSKFILLD SMLLFFTVLT 240
  241 MYCLVKVHTL AIARVGSNSK TPLTKLEIKW YILTGISIGC VCSVKWVGLF VTALVGFYTI 300
  301 VDLWIKFYQT FAIDKKSPKK MSVVNYLIHW VVRIFTLIII PMTIYVATFK VHFMVLNHTG 360
  361 PDDGTLSTLL QGSLIGNDLQ SGPRSVAFGS LVTIRSQGLS PNLIHSHPHN YPQGSQEQQV 420
  421 TTYGFKDDNN EFLFEFGVDA GLRNQHATLE NENSTRNGGN DDDYYHVIIH DGDTVRINHK 480
  481 NTGSYLRANA VGAPITSSSY EVSCFGDVES NDWADEWVIE IQSQDQSPDP MFQDEDPSEI 540
  541 HSVSTSFRLK HKQLGCYLAT TGKSYPAWGY QQGEVVCKYS VFSRDKNTWW NIEKHVNNKL 600
  601 PLPATEYVPP KPKFWKEFIL LNYAMMASNN ALIPDPDRFD KLSSEWWEWP ILNTGLRMNS 660
  661 WGDADIKYFL LGNPLITWIS TIALIVCPLY LLVVGIKYQR QWILLSATDT SNANPANSQS 720
  721 LSLLAARALL PLAGWVLHYV PFILMGRVKY LHHYVPALYF AIFVAGFIVD AILNLDFSYH 780
  781 NNKFQYIFKV VIYSTLYLVI CISFWYFKDL SFGMEGSSVD YRHLRLLGSW MI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle