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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.3769
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEKRLSPSP ALNEAFETES AVSDTSDTPM TNNFEIPQIQ IPQDSQINPM SPSIHIEEAF  60
   61 VPNDTSSASN FGMLSSANFS TDSLNDTTEP FVDYYNNSNS NNGSPRRYSN SSLTNSPRIG 120
  121 RANSNSATSR SRPLSAFLMD SSNAISEDGQ PIQPVFNNTP RSRNSLTFGI KTPVSSTFAN 180
  181 NYTPPPLAAP TGPYRSSSPT RQSSPSRINK HHRSTSPVRR GSSPTKANNN NNNNSNPFNF 240
  241 QSQDLMYQTN LNVSNGSNLS LPVKPAHRKG HKYKHSSISM NLFQEPPPVD IGMTQLSAIP 300
  301 DSYPIPNFNE TLNSITPNQK LRFMWSGFHV GLSLIIFTIG FKFKLPSLST LAHLVFYDSL 360
  361 GSLLIVFVDT MSNFDVWNKS SLAYPFGLGR IEVLVGFALS TSLVMVGFDL FSHFIEEFII 420
  421 LWVSPDNHDD HEHSSHNVHA EPGNNGNSNW FIYIVVLIVT MAVSLFSSNY ILTYDRITEM 480
  481 INGQDDTDLK GNFPTKRNIS NGSLINEANT IDNNTTGEKL KKIVSVWKKN PTHLITLSYT 540
  541 LFLLVGPLIP QSLTSDLAID INEAATITVA LLLCYNGWKL VKTLGGILLC SFPYSDYDYH 600
  601 MLKSRIIDQI LSKDFFKQTY RIEKFFITKF NYRLFVIGMK INMKGANSDE EVRMRFEINR 660
  661 IICNELEKLD NSSKLVKPEI TIDIDRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle