YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.5303, orf1...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYFTIATVL TLASSALAAI RDVQLFAQSS NEEINNLGLI SRREGAGVNY LFLASGAETL  60
   61 KFDDETFTIF SELQTGSTTA RQSLVVSGGV VQLSVSGQPL HVEIAEDGSV KFAGSDSVAA 120
  121 AKNINDPYNY SKDSFAVVTN GGEGSIPFKI IAKFIGGGKS SSVTKHTEAP TTSPVYSNKT 180
  181 VTVFTTYCPE STTITLTICS EVCTPTVIET SGSVTVSSVL PSSSTEAPPK TSVAAPSTTA 240
  241 EAQTTAPVTS YEGGANEIVG GGSMAIALAA AAIGLVI

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	277	0.98