YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238881454
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKNFKQKNV NLFKHSNLFR PSIMISRQLM GLVPKPSVTV RRFFSTSSII LQKSATPGSS  60
   61 TSIPHPHVTS ADYKPPVTID RELPDPFSKR KTNRRYLLIY GIGITLSCIA IFNYEKTQSP 120
  121 IITSSLYFLR RSQPSIELLG KDIDYSSSWP WIWGKLNTVQ GIINIEFSVK GSKGNGVVKL 180
  181 NATRESKAHP FDVHQFVLEV ERDGKKQVVD LTKEPNFDFM

Type	Start	End	Confidence
Cytoplasmic	1	95	0.94
Transmembrane Helix	96	114	0.93
Non-Cytoplasmic	115	220	0.98