YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76573704
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDKKQTKKK KSFFFATHTT MSQQPHLRLG STAPDFKADT TNGPISFHEY IGDSWAILFS  60
   61 HPAAHTSVCS TELSAFARLE PEFTKRGVKL LAISADPVEA NSDWIDDMED FSGSRVKFPI 120
  121 IADPERKVAT LYDMIDHQDA TNLDDKGLQL TIRAVFIIDP SKKIRLIMTY PASTGRNTAE 180
  181 VLRVLDSLQL VDKQKVITPI NWVPGDDVLV HMGVPDDEAR VLFPKYRAIK PYIRLTPLEK 240
  241 EDK

Type	Start	End	Confidence
Signal Peptide	1	22	0.52
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	243	0.99