YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.7307
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDKRELLKQ PIHGIYIPIG LILFGTWIFG WEYMPYSIGF IVVIVSIQYY GALKRASSMH  60
   61 QVKWQEFELL DKTLIAPMTS IYRFKLRRED EVLDIPTGHS LACCFNVDGK DEVRFYTPIS 120
  121 NQFDKGFFDI LVKHYEHGVV TKKLANLQVG QTVQFRGPFG KLQYVPNSAK ELALVAGGTG 180
  181 ITPMLQVITA IITNLEDDTK IKLLFANNTE RDILLKDELD NMAQKYPGLE IKYVTGKFVD 240
  241 KKSFEFLPSP TSDSKIFICG PPAFVEYINE MTKDAGFEKD QVFCF

Type	Start	End	Confidence
Cytoplasmic	1	11	0.91
Transmembrane Helix	12	30	0.94
Non-Cytoplasmic	31	35	0.74
Transmembrane Helix	36	53	0.92
Cytoplasmic	54	285	0.91