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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.7298
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYNNPNNSN SHLRPHAYNN SRRDDSDGDE SSIEFLNQRS NTPLTQGTYN YHNTSTNSLN  60
   61 FQQPEPIYRN QTRTSLSDSY YDHPIFDTSQ TQIQPPHDNP FTESYEMTDT SYQGNDHHYR 120
  121 TGQPNHLMNP TYNQAFIPHV YDEEDNDEQE YDQRIQYNQF QGDHFDLAAI SYADDESQSQ 180
  181 LDYVPTERVI PEGEEEEEEG ETSFEKEPGS ETISGPFGEE RSFEEPPPQQ EVRSKKLTRA 240
  241 TGLNGHLVLD CPVADELLSK FPDYNPAEKS GGLSREFAFM RYTAVTCGPS NFYRDAYILR 300
  301 PVHYPIPRQT ELMIVITMYN EDDILLGRTL KGVFKNIKYL ESKARSSTWG KDSWKKIVVC 360
  361 IVSDGRTKIN ERAQALLAGL GVYQEGLAKS RVDDKKVQAH MFEYTTRVGI SKVTDDVVKL 420
  421 TTEKVVPVQM LFCLKETNAK KINSHRWCFQ AIGQVLDPKI VVLLDCGTQP SGRSLYELWK 480
  481 EFDRDHRVAG ACGEITTSLK KRQMITNPLV YGQNFEYKIS NILDKPTESS FGFISVLPGA 540
  541 FSAYRFIALQ NDINGVGPLE KYFKGEFLHS SGELDPNDDE FQMKHLMLKE EAGIFTSNMY 600
  601 LAEDRILCFE LVAKRGCNWL LRYCKSARAE TDVPEGLAEF ILQRRRWLNG SFFAAIYSLV 660
  661 HFYKVWTSSH SFGRKIFLHI EFFYQLINLI VSWFSIGSYF LVFRILTTSL GDKALGFAPG 720
  721 KILSVIFLWL YLASIVTTFV LSFGNKPKGT EKFYVTIVIF FAILMAYMIF AAIFMAVHSI 780
  781 QDIYRSGTRI TVSLFFQNSE FRDLVVATSS TYALYFLASF LYFEPWHMFT SFVQYILLSP 840
  841 SYVNVLNIYA FCNIDDISWG TKGEVGGKSL GEAKLREDGT FDVSVPISKE QINQSYLDQL 900
  901 EKIRDPAPPE EKVLVTNTED YYAFIRSMTV LVWMFTNFVV IALVLETGGF NQFVEATDLA 960
  961 NLKSNRAAVF LTVILWTVAF MALFRFIGCI YYLITRLGRE IKASEHATK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle