YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.12701, orf...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSFELTPTL KETINASSLS KDQKQKLLSN SHLTHADLIK FYQTCHPTST LLQLIQQTKL  60
   61 YIPPYKTYIQ PKTSEFIKTM EKLRLEAKEQ EYRRLINPTP QYSTLYDKKL EDYDLAPTPQ 120
  121 QASKELKNQL TTIINVFISV GSVSYAIWYW TETSWGLPVS YRALLSVFFG LLVLVAEVVV 180
  181 YMGYINKIED ARDKERKKKE VKKVVRSINL KLD

Type	Start	End	Confidence
Cytoplasmic	1	129	0.99
Transmembrane Helix	130	150	0.92
Non-Cytoplasmic	151	162	0.86
Transmembrane Helix	163	185	0.91
Cytoplasmic	186	213	0.97