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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RMD11_CANAL
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNLPNPSL IGILLVISTH SGPQLIYKYP FDLSNDPSRD ESKYALDDNE DDELYDHEES  60
   61 EDENEVNENE MYGVNSRNWD SKHIDYYMGT KSDLLKFLDE QDSRRRKITT TSPSEEKHTK 120
  121 EKHGLTKTIS KSSTMASSST TSPPESSIQG EIFGTDAAYI CEMLAPPKQM CNTRFEMTIQ 180
  181 DKLFLGLPVH RSDNGQWRSI GHNNEHDEEE THTAKNSLNM FHLVFVMNPP VIESNYRVDE 240
  241 MFHYVISRLS LVLRYEQQKH DYVSQQVKNI LALRESLEGN ESLLTEKSSL SRVIRDCFEG 300
  301 ISTSTIANLS INGKLRSFQI PIKTEFHSLP DPSVPFLPAS YLSSTVELLG DTSFINVGET 360
  361 SRYGHAFNSV QDEENSAEKI IVYFALLLLD DPESIIKDMK TETDSTLAKF IRMIEPTESL 420
  421 LKLSARNSKL DISQIKDFAF HLIYWRRARV ILPLSSRSVY IVSPMAPITI KLYDDISFFN 480
  481 RRFPTLPSLP HFLKLLSPQS RKPQQFATVI PSKDHRDRYL QALGWLIKHG YVTQLQTFIW 540
  541 LKISRKIKIK VEEDIENENL AKKKKKQKNG SVTVATANSS KTEAPIMPTD NTSKQVSDSK 600
  601 DSDKPEDDEY ASKPRLDGLH EHIDGTPIVT LVQGDDTIIL DPGRATTLER RWINKIIYEE 660
  661 CKLSPELTAV FYKLLKYMNG KNSLELLLLK ENISRSELRK LLLSIEEHII SVRHW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle