YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	orf19.6424, orf1...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECVGEKKKF WSRKRERKGK KERKKKSNGM KKKYAHLILE VDCLSFSFFF FWVCFLSSTT  60
   61 LMSLCLIRLQ EERKQWRKTH PFGFFAKPNK ASDGSLDLKH WTAGIPGKEG TIWEGAVYPV 120
  121 TLEFPDEYPS KPPKVKFRPK FYHPNVYPSG TVCLSILNES QDWKPAITLT QILLGVQELL 180
  181 DTPNKESPAQ EDAYRHFVHD MNTYVKRVKA EVKKYMTQE

Type	Start	End	Confidence
Non-Cytoplasmic	1	45	0.59
Transmembrane Helix	46	67	0.81
Cytoplasmic	68	219	0.57