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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: orf19.6411, orf1...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTGKVLEPS LVKDLSNHIY EKRKATAFQI ESLTKNALGH NDSQTIYKII NELTELTSTG  60
   61 TNSAKMGAIT ALGSVSVALG SFAIAYFLED IVKPIFSTFK DTDARVRYYA CESLYNVAKI 120
  121 ARGEILIYFN DIFDILCILV SDSESSVKNA ADILDRLVKD IVSAKATNYV SILQQQQESQ 180
  181 IRSNLVDAQG NAIQVNEPQD PSKAFSLPKF VPTLLERMYT TDPFTKKFLL SWLELFDDIP 240
  241 SLELVRFLPE FLKPLIQFLF NNSPTDIRSE TENLLNVFLE EIKYITKIKI DARKKELANK 300
  301 KTKQAELDAN VKKDKQEHGS PNLKLHDTES AIDEDSGADD EASIKSDDTT IVRRPLASGL 360
  361 TTKPTEGHNK IEVSGSDAKE EHEENEEVTL GQDIFIDYEK IILILLSFLK SPESESSFKD 420
  421 LGSEPHEIYC QVQFIAIKWL RDILEMAPSS ILKQFPECVG VTLKNISKTD KAQDFELRDS 480
  481 FLDFNMAMQS FLYKFNDASL DEFNETLGLD KETNTEFNEV KLPLTLSAIV KEYLDSVSEL 540
  541 ARTTSLDWMI FIYERNPTEF MSLFQAEANN FELTDLLKYD TSNEVILKVL TLMAKISEAN 600
  601 QQFFKNFIVK LVKIFELDGT EKTFKVEFII RKLCVSLNSE LIFTALSEVL ITLSDLDFLN 660
  661 TMIVTLNNIL LTSQELLPFR KKLKGLDSNK VEDWQLFSSL FQSWCHNAPS AISLCLLTSN 720
  721 YELSYLIIKN LSELEVTSQL LIQLDVLVQL LESPIFMKLR LNLLEPEKHP YLFKTLYGLL 780
  781 MILPQSNTFM SLRNRLTTVS NYNSNSGPQF HLSTPLTTPT PAPGTTTAPI PSGSSTTSQS 840
  841 IRRKRIYEML DKFIKIQDSH EKYNNSNKRM NNPVGYNLES ASVFPVNSLK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle